Uses of Class
uk.ac.ebi.ep.mm.Entry

Packages that use Entry

uk.ac.ebi.ep.mm
uk.ac.ebi.ep.mm.app

Uses of Entry in uk.ac.ebi.ep.mm

Methods in uk.ac.ebi.ep.mm that return Entry

Entry	MegaLuceneMapper.getEntryForAccession(MmDatabase db, String accession)
Entry	MegaJdbcMapper.getEntryForAccession(MmDatabase db, String accession) Retrieves an entry for a given accession.
Entry	MegaMapper.getEntryForAccession(MmDatabase db, String accession) Retrieves an entry for a given accession.
Entry	MegaDbMapper.getEntryForAccession(MmDatabase db, String accession)
Entry	XRef.getFromEntry()
Entry	XRef.getToEntry()

Methods in uk.ac.ebi.ep.mm with parameters of type Entry

void	MegaJdbcMapper.deleteEntry(Entry entry) Deletes one entry and all the associated accessions and xrefs.
Collection<XRef>	MegaLuceneMapper.getXrefs(Entry entry)
Collection<XRef>	MegaJdbcMapper.getXrefs(Entry entry)
Collection<XRef>	MegaMapper.getXrefs(Entry entry) Retrieves cross references from the mega-map regardless of the referencing/referenced database.
Collection<XRef>	MegaDbMapper.getXrefs(Entry entry)
Collection<XRef>	MegaLuceneMapper.getXrefs(Entry entry, MmDatabase... db)
Collection<XRef>	MegaJdbcMapper.getXrefs(Entry entry, MmDatabase... dbs)
Collection<XRef>	MegaMapper.getXrefs(Entry entry, MmDatabase... db) Retrieves cross references from the mega-map.
Collection<XRef>	MegaDbMapper.getXrefs(Entry entry, MmDatabase... dbs)
void	XRef.setFromEntry(Entry fromEntity)
void	XRef.setToEntry(Entry toEntity)
void	MegaLuceneMapper.writeEntry(Entry entry)
void	MegaJdbcMapper.writeEntry(Entry entry)
void	MegaMapper.writeEntry(Entry entry) Writes one entry to the mega-map.
void	MegaDbMapper.writeEntry(Entry entry)

Method parameters in uk.ac.ebi.ep.mm with type arguments of type Entry

Collection<XRef>	MegaLuceneMapper.getXrefs(Collection<Entry> entries, MmDatabase... db)
Collection<XRef>	MegaJdbcMapper.getXrefs(Collection<Entry> entries, MmDatabase... dbs)
Collection<XRef>	MegaMapper.getXrefs(Collection<Entry> entries, MmDatabase... db) Retrieves cross references from the mega-map for several entries.
Collection<XRef>	MegaDbMapper.getXrefs(Collection<Entry> entries, MmDatabase... db)
void	MegaLuceneMapper.write(Collection<Entry> entries, Collection<XRef> rels)
void	MegaJdbcMapper.write(Collection<Entry> entries, Collection<XRef> xrefs)
void	MegaMapper.write(Collection<Entry> entries, Collection<XRef> xrefs) Writes entries and relationships to the mega-map.
void	MegaDbMapper.write(Collection<Entry> entries, Collection<XRef> xrefs)
void	MegaLuceneMapper.writeEntries(Collection<Entry> entries)
void	MegaJdbcMapper.writeEntries(Collection<Entry> entries)
void	MegaMapper.writeEntries(Collection<Entry> entries)
void	MegaDbMapper.writeEntries(Collection<Entry> entries)

Uses of Entry in uk.ac.ebi.ep.mm.app

Methods in uk.ac.ebi.ep.mm.app that return Entry

Entry	CompoundsDAOImpl.computeChebiEntry(String chebiAccession, String entryName)
Entry	CompoundsDAOImpl.computeUniprotEntry(String reference_id, String reference_name)

Methods in uk.ac.ebi.ep.mm.app with parameters of type Entry

XRef	CompoundsDAOImpl.computeXref(Entry chebiEntry, Entry uniprotEntry, String location_in_ref)
void	DatabaseResources.writeEntry(Entry entry)

Method parameters in uk.ac.ebi.ep.mm.app with type arguments of type Entry

void	DatabaseResources.writeEntries(Collection<Entry> entries)